STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NHR8_LEPOCShKT domain-containing protein; Belongs to the CRISP family. (245 aa)    
Predicted Functional Partners:
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
    
  0.891
W5N9F8_LEPOC
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 
  0.589
nans
N-acetylneuraminic acid synthase a.
     
 0.531
W5M1K4_LEPOC
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
  0.530
nanp
N-acetylneuraminic acid phosphatase.
     
 0.527
cmas
Cytidine monophosphate N-acetylneuraminic acid synthetase a.
     
 0.518
l2hgdh
L-2-hydroxyglutarate dehydrogenase.
    
  0.501
W5M3U0_LEPOC
NADH:ubiquinone oxidoreductase core subunit V2.
    
  0.488
W5MX10_LEPOC
Malate synthase-like.
    
  0.486
W5NJ40_LEPOC
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.459
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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