STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dtlDenticleless E3 ubiquitin protein ligase homolog (Drosophila). (667 aa)    
Predicted Functional Partners:
W5LV61_LEPOC
Damage-specific DNA binding protein 1.
    
 0.999
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.986
W5MBI2_LEPOC
Chromatin licensing and DNA replication factor 1.
   
 
 0.968
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
  
 0.962
cul4a
Cullin 4A; Belongs to the cullin family.
    
 0.961
cul4b
Cullin 4B; Belongs to the cullin family.
    
 0.961
W5N2L8_LEPOC
WD repeat and HMG-box DNA binding protein 1.
   
  
 0.954
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
  
 0.929
mcm10
Minichromosome maintenance 10 replication initiation factor.
   
  
 0.901
W5NIU6_LEPOC
Exonuclease 1.
   
 
 0.889
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.