STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmtc3Transmembrane O-mannosyltransferase targeting cadherins 3. (912 aa)    
Predicted Functional Partners:
leo1
Uncharacterized protein.
    
 0.934
ints1
Integrator complex subunit 1.
    
 0.898
ints13
Integrator complex subunit 13.
    
 0.887
ak9
Adenylate kinase 9.
   
 0.881
W5MJ27_LEPOC
Integrator complex subunit 3.
    
 0.873
ints10
Integrator complex subunit 10.
   
 0.858
ints9
Integrator complex subunit 9.
  
 0.784
W5M2E8_LEPOC
Integrator complex subunit 11.
  
 0.772
bbs9
Bardet-Biedl syndrome 9.
    
 0.764
ints12
Integrator complex subunit 12.
    
 0.754
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.