STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppm1bProtein phosphatase, Mg2+/Mn2+ dependent, 1Bb. (403 aa)    
Predicted Functional Partners:
map3k7
Mitogen-activated protein kinase kinase kinase 7.
  
 0.887
map2k7
Mitogen-activated protein kinase kinase 7.
   
  0.749
W5NNN7_LEPOC
Uncharacterized protein.
   
 0.723
map2k4
Mitogen-activated protein kinase kinase 4b; Belongs to the protein kinase superfamily.
   
 
 0.716
prkaa2
Non-specific serine/threonine protein kinase.
   
  0.656
ttc33
Non-specific serine/threonine protein kinase.
   
  0.656
W5ML23_LEPOC
Uncharacterized protein.
  
  0.636
W5MIF3_LEPOC
Mothers against decapentaplegic homolog.
    
 0.621
W5N5D9_LEPOC
Mothers against decapentaplegic homolog.
    
 0.621
W5M045_LEPOC
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.
   
  0.587
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.