STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsp90ab1Heat shock protein 90, alpha (cytosolic), class B member 1. (727 aa)    
Predicted Functional Partners:
W5MDG7_LEPOC
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.973
W5MKE7_LEPOC
Prostaglandin E synthase 3b (cytosolic).
   
 0.961
W5NC99_LEPOC
Serine/threonine-protein phosphatase.
    
 0.927
tsc2
TSC complex subunit 2.
   
 0.924
aarsd1
Alanyl-tRNA synthetase domain containing 1.
  
 0.911
tbc1d7
TBC1 domain family, member 7.
    
 0.910
W5MSM4_LEPOC
Protein kinase domain-containing protein.
   
 0.907
nr3c1
Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor).
    
 0.907
ahsa1
AHA1, activator of heat shock protein ATPase homolog 1a.
   
 
 0.904
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
  
0.903
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.