STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102684654Solute carrier family 38 member 2. (516 aa)    
Predicted Functional Partners:
W5MUC8_LEPOC
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.742
LOC102690405
Ras-related GTP binding A.
   
 0.713
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.680
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.678
W5NJC4_LEPOC
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.676
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.667
rragc
Ras-related GTP binding Ca.
    
 0.649
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.621
sin3b
SIN3 transcription regulator family member B.
    
 0.532
W5ND19_LEPOC
SIN3 transcription regulator family member Aa.
    
 0.532
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.