STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfp36l2Uncharacterized protein. (432 aa)    
Predicted Functional Partners:
mapkapk2
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
    
 0.906
exosc8
Exosome component 8.
    
  0.850
zfp36l1
Zinc finger protein 36, C3H type-like 1a.
  
  
 
0.827
xrn1
5'-3' exoribonuclease 1.
    
 0.822
cnot1
CCR4-NOT transcription complex, subunit 1.
    
 
 0.744
dcp2
Decapping mRNA 2.
   
 0.740
LOC102698937
Sb:cb81.
  
  
 
0.722
mapkapk3
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
    
 0.677
dcp1a
Decapping mRNA 1A.
    
 0.673
ywhab
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a; Belongs to the 14-3-3 family.
   
  0.668
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.