STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mertkC-mer proto-oncogene tyrosine kinase a. (966 aa)    
Predicted Functional Partners:
LOC102698566
Uncharacterized protein.
   
 0.959
W5LYE8_LEPOC
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.861
traf7
TNF receptor-associated factor 7.
   
 0.751
W5MRF2_LEPOC
GRB2-associated binding protein 1.
    
 0.750
W5MF18_LEPOC
SHC (Src homology 2 domain containing) transforming protein 2.
    
  0.745
W5MUZ9_LEPOC
Protein S.
     
 0.744
SHC4
SHC adaptor protein 4.
    
  0.740
gas6
Uncharacterized protein.
    
 0.739
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
    
 0.674
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.669
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.