STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIK2Glutamate ionotropic receptor kainate type subunit 2. (893 aa)    
Predicted Functional Partners:
grik4
Glutamate receptor, ionotropic, kainate 4.
  
 
0.930
W5MB18_LEPOC
Glutamate receptor, ionotropic, kainate 5; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
  
 
0.853
grin1
Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.
   
0.810
gria2
Glutamate receptor, ionotropic, AMPA 2b.
  
0.763
W5LVW5_LEPOC
Uncharacterized protein.
    
 0.762
grin2a
Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a.
    
0.762
grin2c
Glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb.
    
0.762
gria3
Glutamate receptor, ionotropic, AMPA 3a.
  
 
0.758
LOC102693889
Glutamate receptor, ionotropic, AMPA 1b.
  
 
0.756
gria4
Glutamate receptor, ionotropic, AMPA 4a.
  
 
0.751
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.