STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102695612Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (534 aa)    
Predicted Functional Partners:
hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
    
 0.893
comt
Catechol-O-methyltransferase b.
   
 
 0.892
hsd17b12
Hydroxysteroid (17-beta) dehydrogenase 12a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.887
W5N7M9_LEPOC
Uncharacterized protein.
  
 0.887
LOC102692732
Indoleamine 2,3-dioxygenase 1.
   
 
 0.883
W5MX30_LEPOC
UDP glucuronosyltransferase 1 family, polypeptide B5; Belongs to the UDP-glycosyltransferase family.
   
 0.882
LOC102691070
Transmembrane O-methyltransferase.
   
 
 0.875
W5M5G5_LEPOC
UDP glucuronosyltransferase 2 family, polypeptide A4; Belongs to the UDP-glycosyltransferase family.
   
 0.874
W5NNT2_LEPOC
Sulfite oxidase; Belongs to the cytochrome b5 family.
     
 0.874
LOC102687541
Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family.
  
 
0.873
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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