STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fmn2Formin 2a. (1412 aa)    
Predicted Functional Partners:
pfn4
Profilin; Belongs to the profilin family.
    
 0.805
spire1
Spire-type actin nucleation factor 1b.
    
 0.772
W5MAK8_LEPOC
Zgc:114123.
    
 0.750
PFN2
Profilin; Belongs to the profilin family.
    
 0.741
pfn3
Profilin; Belongs to the profilin family.
    
 0.741
FYTTD1
Forty-two-three domain containing 1.
    
 0.712
gas7
Growth arrest-specific 7a.
    
 0.678
W5M4U3_LEPOC
Spire-type actin nucleation factor 2.
    
 0.661
W5NLZ4_LEPOC
Uncharacterized protein.
    
 0.661
W5NMQ2_LEPOC
Uncharacterized protein.
    
 0.661
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.