STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd2bMajor facilitator superfamily domain containing 2B. (535 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
    
  0.723
tk1
Thymidine kinase.
    
  0.715
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
  0.696
gapdhs
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.655
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.655
rrm1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.652
dtymk
Deoxythymidylate kinase (thymidylate kinase).
    
 0.513
cmpk2
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
    
 0.513
LOC102692060
Uncharacterized protein; Belongs to the 5'-nucleotidase family.
    
  0.510
W5NJV3_LEPOC
5'-nucleotidase, ecto (CD73); Belongs to the 5'-nucleotidase family.
    
  0.510
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.