STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NIS4_LEPOCU3snoRNP10 domain-containing protein. (319 aa)    
Predicted Functional Partners:
W5M7L2_LEPOC
PWP2 small subunit processome component.
   
 0.997
W5MCA8_LEPOC
Nucleolar protein 6.
   
 0.997
tbl3
Transducin (beta)-like 3.
   
 0.997
wdr36
WD repeat domain 36.
   
 0.997
W5N1N1_LEPOC
Programmed cell death 11.
   
 0.997
W5NDJ6_LEPOC
UTP20 small subunit processome component.
   
 0.997
W5MYW8_LEPOC
WD repeat domain 3.
   
 0.996
utp4
UTP4 small subunit processome component.
   
 0.995
nop58
NOP58 ribonucleoprotein homolog (yeast).
   
 0.995
bms1
BMS1 ribosome biogenesis factor.
   
 0.995
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.