STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chkbCholine kinase beta. (445 aa)    
Predicted Functional Partners:
pcyt2
Phosphate cytidylyltransferase 2, ethanolamine.
   
 
 0.921
W5N7F7_LEPOC
Regulatory associated protein of MTOR, complex 1.
    
 0.916
pcyt1b
Phosphate cytidylyltransferase 1, choline, beta b.
     
 0.901
pcyt1a
Phosphate cytidylyltransferase 1, choline, alpha b.
     
 0.900
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
    
 0.885
W5M481_LEPOC
Phosphoethanolamine methyltransferase.
    
 0.872
phospho1
Phosphatase, orphan 1.
     
 0.869
chka
Choline kinase alpha.
  
  
 
0.858
W5MZH1_LEPOC
Ethanolamine-phosphate phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  0.856
chat
Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family.
 
 
 
  0.855
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.