STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pinx1PIN2 (TERF1) interacting telomerase inhibitor 1. (348 aa)    
Predicted Functional Partners:
dhx15
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
 
 0.977
W5NAT9_LEPOC
WD repeat domain 46.
   
   0.973
bysl
Bystin-like.
   
   0.971
W5MB94_LEPOC
Fibrillarin.
   
   0.960
nom1
Nucleolar protein with MIF4G domain 1.
   
   0.957
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 
 0.955
W5MND4_LEPOC
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.929
LOC102683569
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.929
LYAR
Ly1 antibody reactive.
   
   0.926
mak16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
   0.925
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.