STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NJB2_LEPOCUncharacterized protein. (615 aa)    
Predicted Functional Partners:
SHANK3
SH3 and multiple ankyrin repeat domains 3a.
 
 
  0.972
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
   
 0.932
dlgap1
Discs, large (Drosophila) homolog-associated protein 1a.
   
 0.881
W5NKZ3_LEPOC
Discs, large (Drosophila) homolog-associated protein 2b.
   
 0.881
W5LZ50_LEPOC
Discs, large (Drosophila) homolog-associated protein 4b.
    
 0.876
W5N037_LEPOC
Uncharacterized protein.
    
 0.862
W5MD73_LEPOC
Uncharacterized protein.
  
 
0.853
rap1a
RAP1A, member of RAS oncogene family b.
   
 0.844
rap1b
RAP1B, member of RAS oncogene family.
   
 0.844
cdc42
Cell division cycle 42.
   
  0.825
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.