STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102698218Zgc:77752. (634 aa)    
Predicted Functional Partners:
porcn
Porcupine O-acyltransferase; Belongs to the membrane-bound acyltransferase family.
    
 0.725
wls
Wnt ligand secretion mediator.
    
 0.719
itsn2
Intersectin 2b.
    
  0.688
ryk
Receptor like tyrosine kinase.
    
 0.616
itsn1
Intersectin 1 (SH3 domain protein).
    
  0.575
LOC102682995
Notum pectinacetylesterase 2.
    
 0.529
notum
Notum, palmitoleoyl-protein carboxylesterase a.
    
 0.529
mfrp
Membrane frizzled-related protein.
    
 0.513
W5M4V5_LEPOC
Dishevelled segment polarity protein 1a.
    
 0.507
W5MP85_LEPOC
Dishevelled segment polarity protein 3a.
    
 0.507
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.