STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sbf1SET binding factor 1. (1924 aa)    
Predicted Functional Partners:
mtmr2
Myotubularin related protein 2.
   
0.756
mtm1
Myotubularin 1.
   
0.756
mtmr1
Myotubularin related protein 1b.
   
0.756
rab21
RAB21, member RAS oncogene family.
    
 0.732
MTMR4
Myotubularin related protein 4.
    
0.715
mtmr3
Myotubularin related protein 3.
    
0.715
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.710
dipk2a
Divergent protein kinase domain 2Aa.
     
 0.602
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.596
pik3c2a
Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha; Belongs to the PI3/PI4-kinase family.
    
 0.591
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.