STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NJJ0_LEPOCUncharacterized protein. (250 aa)    
Predicted Functional Partners:
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.706
lrfn5
Leucine rich repeat and fibronectin type III domain containing 5a.
    
 0.670
ptk7
Protein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.606
ntrk1
Tyrosine-protein kinase receptor.
    
 0.601
W5M2U5_LEPOC
Tyrosine-protein kinase receptor.
    
 0.601
ntrk3
Tyrosine-protein kinase receptor.
    
 0.601
W5MP68_LEPOC
Leucine rich repeat containing 24.
    
  0.595
grb2
Growth factor receptor-bound protein 2b.
   
 0.591
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.572
lrit3
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.
    
  0.572
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.