STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102692212Tetraspanin. (262 aa)    
Predicted Functional Partners:
itga3
Integrin, alpha 3a; Belongs to the integrin alpha chain family.
    
 0.884
itgb4
Integrin beta.
    
 0.794
col17a1
Uncharacterized protein.
     
 0.766
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
    
 0.735
itga6
Integrin, alpha 6b; Belongs to the integrin alpha chain family.
    
 0.735
W5MQU6_LEPOC
Platelet endothelial aggregation receptor 1.
     
 0.716
sema3d
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family.
   
  
 0.634
sema3e
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family.
      
 0.628
grm3
Glutamate receptor, metabotropic 3.
      
 0.628
cd9
Tetraspanin.
    
0.614
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.