STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NJS3_LEPOCCD109 molecule. (1307 aa)    
Predicted Functional Partners:
cbx8
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.833
rnf2
Ring finger protein 2.
    
 0.823
bmi1
Bmi1 polycomb ring finger oncogene 1b.
    
 0.746
W5N8B6_LEPOC
RING-type domain-containing protein.
    
 0.746
cbx2
Chromobox homolog 2 (Drosophila Pc class).
    
 0.740
LOC102690826
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
 0.728
CFP
Complement factor properdin.
   
 0.722
c9
Complement component 9.
   
 0.711
SCMH1
Scm polycomb group protein homolog 1.
    
 0.692
scml2
Scm polycomb group protein like 2.
    
 0.692
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.