STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NJV2_LEPOCMeiosis-specific, MEI4 homolog (S. cerevisiae). (372 aa)    
Predicted Functional Partners:
W5NB97_LEPOC
REC114 meiotic recombination protein.
    
 
 0.655
cenpq
Uncharacterized protein.
      
 0.591
W5M6W8_LEPOC
Centromere protein V.
      
 0.547
W5N674_LEPOC
Uncharacterized protein.
      
 0.537
W5MHX5_LEPOC
Polynucleotide kinase 3'-phosphatase.
    
 
 0.440
LOC102692212
Tetraspanin.
      
 0.428
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.