STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX14Sorting nexin 14. (959 aa)    
Predicted Functional Partners:
W5N028_LEPOC
Sorting nexin 13.
   
 
0.705
snx25
Sorting nexin 25.
   
 
0.570
synrg
Synergin, gamma.
      
 0.523
W5MUY6_LEPOC
Syntaxin 6; Belongs to the syntaxin family.
    
 0.492
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
     
 0.484
snx12
Sorting nexin 12.
     
 0.476
snx3
Sorting nexin 3.
     
 0.476
snx10
Sorting nexin 10b.
     
 0.472
snx11
Sorting nexin 11.
     
 0.464
MUTYH
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
      
 0.454
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.