STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PM20D2Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family. (451 aa)    
Predicted Functional Partners:
CYB5R4
Cytochrome b5 reductase 4.
    
  0.760
gapdhs
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.685
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.685
W5NJ40_LEPOC
Epoxide hydrolase 2, cytoplasmic.
    
 0.629
allc
Allantoicase.
   
 
 0.593
W5MX10_LEPOC
Malate synthase-like.
   
 
 0.577
agxt
Serine--pyruvate aminotransferase.
  
 
 0.568
tk1
Thymidine kinase.
    
 0.558
W5NNT2_LEPOC
Sulfite oxidase; Belongs to the cytochrome b5 family.
     
 0.555
pgrmc2
Progesterone receptor membrane component 2; Belongs to the cytochrome b5 family.
      
 0.547
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.