STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NKB1_LEPOCMAM domain containing glycosylphosphatidylinositol anchor 1. (906 aa)    
Predicted Functional Partners:
nlgn2
Neuroligin 2b.
    
 
 0.729
nlgn1
Neuroligin 1.
    
 
 0.717
nlgn4x
Neuroligin 4 X-linked b.
    
 
 0.717
nlgn3
Neuroligin 3a.
    
 
 0.717
W5M9X3_LEPOC
ANK_REP_REGION domain-containing protein.
    
 0.513
ptk7
Protein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 
0.479
W5MSG0_LEPOC
V-set_CD47 domain-containing protein.
    
  0.441
slit2
Slit homolog 2 (Drosophila).
    
 0.431
slit3
Slit homolog 3 (Drosophila).
    
 0.431
slit1
Slit homolog 1a (Drosophila).
    
 0.431
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.