STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rassf3Ras association domain family member 3. (224 aa)    
Predicted Functional Partners:
STK4
Serine/threonine kinase 4.
    
 0.750
W5MUB8_LEPOC
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.750
MTUS1
Uncharacterized protein.
    
 0.750
W5MTY5_LEPOC
F-box and WD repeat domain containing 11.
    
  0.514
W5MTZ4_LEPOC
F-box and WD repeat domain containing 11.
    
  0.514
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
  0.514
W5LW76_LEPOC
Serine/threonine-protein phosphatase.
    
  0.469
W5M3M3_LEPOC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.469
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.469
sav1
Salvador family WW domain containing protein 1.
    
 
 0.458
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.