STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenpkCentromere protein K. (210 aa)    
Predicted Functional Partners:
W5ML56_LEPOC
CENP-H domain-containing protein.
   
 0.994
W5NDY1_LEPOC
Centromere protein I.
   
 0.991
W5LX96_LEPOC
Centromere protein N.
   
 0.990
cenpq
Uncharacterized protein.
   
 0.988
W5N8W0_LEPOC
Uncharacterized protein.
   
 0.977
cenpw
Si:ch211-195p4.4.
   
 0.972
cort
Cortistatin.
   
 0.906
CENPS
Centromere protein S.
   
 0.906
slc25a42
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.876
dut
Deoxyuridine triphosphatase.
   
 0.876
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.