STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR1B1Aldo_ket_red domain-containing protein. (328 aa)    
Predicted Functional Partners:
sord
Sorbitol dehydrogenase.
  
 0.776
qdpr
Zgc:171517.
  
 0.707
W5NJS5_LEPOC
Glutamate-cysteine ligase, catalytic subunit.
    
 0.706
aldh7a1
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.697
W5MDJ9_LEPOC
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.683
dhdh
Dihydrodiol dehydrogenase (dimeric), like.
  
 
 0.677
GK3P
Glycerol kinase 3 pseudogene; Belongs to the FGGY kinase family.
  
 
 0.674
dhfr
Dihydrofolate reductase.
  
 
 0.673
LOC102683960
Carbonyl reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.668
W5MMM6_LEPOC
Aldehyde dehydrogenase 2 family member, tandem duplicate 2; Belongs to the aldehyde dehydrogenase family.
  
 0.668
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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