STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rwdd1RWD domain containing 1. (242 aa)    
Predicted Functional Partners:
drg2
Developmentally regulated GTP binding protein 2.
   
 
 0.993
denr
Density-regulated protein; Belongs to the DENR family.
   
    0.856
W5MIJ1_LEPOC
Zinc finger CCCH-type containing 15.
   
 
 0.776
W5M0J6_LEPOC
Uncharacterized protein.
    
 
 0.745
W5M0K4_LEPOC
Uncharacterized protein.
    
 
 0.745
W5M0L5_LEPOC
Uncharacterized protein.
    
 
 0.745
MAP3K4
Mitogen-activated protein kinase kinase kinase 4.
    
   0.694
impact
Impact RWD domain protein.
    
 
 0.620
abcf3
ATP-binding cassette, sub-family F (GCN20), member 3.
   
  
 0.583
RWDD2A
RWD domain containing 2A.
      
 0.561
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.