STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NKV7_LEPOCUncharacterized protein. (413 aa)    
Predicted Functional Partners:
W5M8Q8_LEPOC
Lysyl oxidase-like 5b.
 
  
   0.502
W5MAD4_LEPOC
Uncharacterized protein.
 
  
 
 0.489
ptk7
Protein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.479
LOC102694040
Uncharacterized protein.
 
 
   0.447
W5MSG0_LEPOC
V-set_CD47 domain-containing protein.
   
  0.442
lox
Lysyl oxidase a.
 
  
   0.426
HPR
Haptoglobin-related protein.
   
 0.403
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
  0.400
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.