STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnaseh1Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (278 aa)    
Predicted Functional Partners:
rnaseh2a
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
  
 
 0.966
tyms
Thymidylate synthetase.
  
 
 0.951
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.944
W5NKI1_LEPOC
Single-stranded DNA binding protein 1.
   
 
 0.938
gapdhs
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.920
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.920
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.911
iyd
Iodotyrosine deiodinase.
    
 0.894
pgk1
Phosphoglycerate kinase.
    
 0.893
nudt13
Nudix (nucleoside diphosphate linked moiety X)-type motif 13.
    
  0.890
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.