STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102691855Zgc:113142; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (347 aa)    
Predicted Functional Partners:
oxct1
Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.
     
 0.856
hmgcl
3-hydroxy-3-methylglutaryl-CoA lyase.
     
 0.823
hmgcll1
3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1.
     
 0.823
aacs
Acetoacetyl-CoA synthetase.
     
 0.805
LOC102695979
Zgc:113054.
   
 
0.697
bdh2
3-hydroxybutyrate dehydrogenase, type 2.
   
 
 0.697
hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
     
 0.683
dhrs11
Dehydrogenase/reductase (SDR family) member 11a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
0.677
hsd17b2
Hydroxysteroid (17-beta) dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.667
W5M5N5_LEPOC
O-acyltransferase.
   
 
  0.651
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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