STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NL37_LEPOCAcid sphingomyelinase-like phosphodiesterase. (439 aa)    
Predicted Functional Partners:
brinp1
Bone morphogenetic protein/retinoic acid inducible neural-specific 1.
      
 0.580
W5LY64_LEPOC
Tetratricopeptide repeat domain 9C.
      
 0.559
npc2
Niemann-Pick disease, type C2.
   
 
  0.550
sqor
Sulfide quinone oxidoreductase.
      
 0.549
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
      
 0.491
btbd10
BTB (POZ) domain containing 10a.
      
 0.416
kctd20
BTB domain-containing protein.
      
 0.416
W5MEU0_LEPOC
Rho GTPase activating protein 1.
      
 0.412
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.