STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clvs2Clavesin 2. (330 aa)    
Predicted Functional Partners:
LOC102685941
Zgc:66447.
    
 
 0.633
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.618
mkln1
Muskelin 1, intracellular mediator containing kelch motifs.
      
 0.601
atp8a2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 
 0.574
W5M302_LEPOC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.537
cltc
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.537
W5M3V4_LEPOC
Ankyrin repeat and FYVE domain containing 1.
    
  0.536
W5LWQ4_LEPOC
Uncharacterized protein.
    
 0.522
W5M9Z8_LEPOC
AP-1 complex subunit gamma.
    
 0.522
lyst
Lysosomal trafficking regulator.
      
 0.509
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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