STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NLC0_LEPOCBrain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (269 aa)    
Predicted Functional Partners:
ntf3
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
  
 
0.955
LOC102692225
Neurotrophin receptor associated death domain.
    
 0.948
ntrk1
Tyrosine-protein kinase receptor.
   
 0.947
W5M2U5_LEPOC
Tyrosine-protein kinase receptor.
   
 0.928
insr
Tyrosine-protein kinase receptor.
    
 0.890
igf1r
Tyrosine-protein kinase receptor.
    
 0.890
NTF4
Neurotrophin 4; Belongs to the NGF-beta family.
    
0.885
mst1r
Macrophage stimulating 1 receptor b.
    
 0.885
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.885
epha2
Eph receptor A2 b.
    
 0.882
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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