STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NLF2_LEPOCMitochondrial ribosomal protein L57. (78 aa)    
Predicted Functional Partners:
gadd45gip1
Growth arrest and DNA-damage-inducible, gamma interacting protein 1.
   
   0.941
mrpl4
Mitochondrial ribosomal protein L4.
    
   0.935
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.935
mrpl30
Mitochondrial ribosomal protein L30.
   
   0.933
W5M1B9_LEPOC
Mitochondrial ribosomal protein L40.
   
   0.933
mrpl16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
  0.933
mrpl47
Mitochondrial ribosomal protein L47.
   
   0.930
mrpl43
Mitochondrial ribosomal protein L43.
   
 
 0.930
W5N790_LEPOC
Mitochondrial ribosomal protein L10.
    
   0.930
mrpl51
Mitochondrial ribosomal protein L51.
   
 
 0.928
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.