STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neurod2Neurogenic differentiation factor. (364 aa)    
Predicted Functional Partners:
TCF4
Transcription factor 4.
    
 
 0.558
W5MFW8_LEPOC
Transcription factor 3a.
    
 
 0.558
tcf12
Transcription factor 12.
    
 
 0.558
insm1
Insulinoma-associated 1b.
   
 0.545
ascl2
Achaete-scute family bHLH transcription factor 1b.
  
 
 0.490
hes2
Hes family bHLH transcription factor 2, tandem duplicate 2.
   
 0.474
LOC102695381
Hairy-related 8a.
   
 0.473
LOC102694699
Hairy-related 8.2.
    
 0.461
HES1
Hairy-related 6.
    
 0.458
hes4
Hairy-related 9.
    
 0.458
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.