STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arf6ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family. (175 aa)    
Predicted Functional Partners:
LOC102692357
Cytohesin 4a.
    
 0.965
cyth3
Cytohesin 1a.
    
 0.962
cyth1
Cytohesin 1b.
    
 0.962
W5N730_LEPOC
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
    
 0.962
kif23
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.950
LOC102686612
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
    
 0.944
itsn2
Intersectin 2b.
    
 0.926
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 0.912
W5M3K8_LEPOC
RalA binding protein 1.
    
 0.896
trim23
Tripartite motif containing 23.
   
 
0.885
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.