STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NMH0_LEPOCUncharacterized protein; Belongs to the complex I LYR family. (77 aa)    
Predicted Functional Partners:
W5MM14_LEPOC
Si:dkey-31b16.7.
    
 
 0.909
W5MSQ5_LEPOC
Succinate dehydrogenase complex, subunit A, flavoprotein (Fp).
    
 
 0.725
sdhaf3
Succinate dehydrogenase complex assembly factor 3.
    
 
 0.625
ppp1r32
Uncharacterized protein.
      
 0.588
lyrm4
Si:ch211-152c8.4; Belongs to the complex I LYR family.
   
  
 0.583
sdhd
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
      
 0.563
W5NCS1_LEPOC
NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae).
      
 0.560
LOC102683765
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
      
 0.556
W5M8N9_LEPOC
Amyloid beta (A4) precursor-like protein 1.
      
 0.499
tac1
Tachykinin 1.
    
 
 0.478
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.