STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrc8dLeucine rich repeat containing 8 VRAC subunit Da. (830 aa)    
Predicted Functional Partners:
W5LVB9_LEPOC
SUEL-type lectin domain-containing protein.
    
   0.786
W5LVS3_LEPOC
SUEL-type lectin domain-containing protein.
    
   0.786
adgrl2
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
    
   0.786
adgrl1
Adhesion G protein-coupled receptor L1a; Belongs to the G-protein coupled receptor 2 family.
    
   0.786
W5N6Q3_LEPOC
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
    
   0.786
LRRIQ4
Leucine rich repeats and IQ motif containing 4.
  
 
0.730
ntng1
Vav 3 guanine nucleotide exchange factor b.
    
 0.724
lrrc8a
Leucine rich repeat containing 8 VRAC subunit Ab.
  
 
0.691
LOC102685669
Leucine rich repeat containing 8 VRAC subunit C.
  
 
0.690
ak9
Adenylate kinase 9.
    
  0.626
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.