STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NMJ6_LEPOCUncharacterized protein. (185 aa)    
Predicted Functional Partners:
W5M075_LEPOC
Ion_trans domain-containing protein.
    
 0.890
W5M5P7_LEPOC
Uncharacterized protein.
   
 0.879
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 0.866
CATSPER3
Cation channel sperm associated 3.
    
 0.792
CATSPERE
Catsper channel auxiliary subunit epsilon.
    
 0.670
EFCAB9
EF-hand calcium binding domain 9.
    
 
 0.591
W5ME77_LEPOC
Ion_trans domain-containing protein.
    
 0.560
cacna1h
Calcium channel, voltage-dependent, T type, alpha 1H subunit b.
    
 0.560
W5MXJ6_LEPOC
Voltage-dependent T-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. This channel gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite ne [...]
    
 0.560
W5MZX8_LEPOC
Calcium voltage-gated channel subunit alpha1 Ia.
    
 0.560
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.