STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nogNoggin; Belongs to the noggin family. (224 aa)    
Predicted Functional Partners:
gdf7
Growth differentiation factor 7.
    
 0.906
bmp4
Bone morphogenetic protein 4.
    
 0.893
W5LZ94_LEPOC
Bone morphogenetic protein 8a.
    
 0.888
W5MFA6_LEPOC
TGF_BETA_2 domain-containing protein.
    
 0.888
LOC102688763
Bone morphogenetic protein 16.
    
 0.882
bmp5
Bone morphogenetic protein 5.
    
 0.879
bmp6
Bone morphogenetic protein 6.
    
 0.878
bmp7
Bone morphogenetic protein 7b.
    
 0.873
bmp2
Bone morphogenetic protein 2a.
    
 0.872
LOC102696589
Noggin; Belongs to the noggin family.
  
  
 
0.860
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.