STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhobUncharacterized protein. (196 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2b.
    
 0.998
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.971
W5MKN6_LEPOC
Rho/rac guanine nucleotide exchange factor (GEF) 2.
   
 0.884
W5M1U6_LEPOC
Rho-associated, coiled-coil containing protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 0.876
W5NIY2_LEPOC
Rho-associated, coiled-coil containing protein kinase 2b; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 0.876
arhgap5
Rho GTPase activating protein 5.
    
 0.872
arhgap35
Rho GTPase activating protein 35b.
    
 0.872
arhgdig
Rho GDP dissociation inhibitor (GDI) gamma.
   
 0.870
arhgdia
Rho GDP dissociation inhibitor (GDI) alpha.
   
 0.870
W5MEU0_LEPOC
Rho GTPase activating protein 1.
    
 0.866
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.