STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccr6Chemokine (C-C motif) receptor 6a; Belongs to the G-protein coupled receptor 1 family. (362 aa)    
Predicted Functional Partners:
W5MJ41_LEPOC
C-C motif chemokine.
    
 0.939
cxcl12
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.918
LOC107079123
SCY domain-containing protein.
    
 0.907
W5MJ25_LEPOC
C-C motif chemokine.
    
 0.899
grk7
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
  0.881
cxcl14
Chemokine (C-X-C motif) ligand 14.
     
 0.871
W5MJ01_LEPOC
SCY domain-containing protein.
    
  0.863
LOC102688480
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
  0.754
LOC102686398
Guanine nucleotide binding protein (G protein), alpha 14a.
    
  0.754
LOC102686598
Uncharacterized protein.
    
  0.754
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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