STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NMZ4_LEPOCTetraspanin. (253 aa)    
Predicted Functional Partners:
cd63
Tetraspanin.
   
 
0.882
laptm5
Uncharacterized protein.
   
  
 0.835
scarb1
Scavenger receptor class B, member 1; Belongs to the CD36 family.
   
 
 0.648
scarb2
Scavenger receptor class B, member 2c; Belongs to the CD36 family.
   
 
 0.648
W5M8J0_LEPOC
Scavenger receptor class B, member 2a; Belongs to the CD36 family.
   
 
 0.648
W5NGH4_LEPOC
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
   
 
 0.648
W5MZ60_LEPOC
Uncharacterized protein.
   
 
 0.641
mst1r
Macrophage stimulating 1 receptor b.
    
  0.593
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.593
W5M845_LEPOC
Uncharacterized protein.
   
  
 0.528
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.