STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NN08_LEPOCPRKC, apoptosis, WT1, regulator. (203 aa)    
Predicted Functional Partners:
W5NHI7_LEPOC
PRKC, apoptosis, WT1, regulator.
 
     0.922
spsb4
SplA/ryanodine receptor domain and SOCS box containing 4a.
    
 
 0.631
spsb1
SplA/ryanodine receptor domain and SOCS box containing 1.
    
 
 0.631
LOC102689778
Si:ch1073-228j22.2.
    
 
 0.631
wt1
WT1 transcription factor a.
    
 
 0.457
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
    
 
 0.453
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.