STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gper1G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (359 aa)    
Predicted Functional Partners:
gnal
Uncharacterized protein.
     
 0.805
W5NMQ4_LEPOC
Uncharacterized protein.
     
 0.805
agt
Angiotensinogen; Belongs to the serpin family.
     
 0.710
pomc
Proopiomelanocortin b.
     
 0.692
gnb5
Guanine nucleotide binding protein (G protein), beta 5b.
     
 0.681
SST
Somatostatin 1, tandem duplicate 1.
     
 0.658
NPB
Neuropeptide B.
     
 0.658
penk
Proenkephalin a.
     
 0.644
nmu
Neuromedin U.
     
 0.625
W5LZ17_LEPOC
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
     
 0.617
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.