STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP8B1Cytochrome P450 family 8 subfamily B member 1; Belongs to the cytochrome P450 family. (511 aa)    
Predicted Functional Partners:
hsd3b7
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase.
  
 0.915
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 0.899
aarsd1
Alanyl-tRNA synthetase domain containing 1.
     
 0.852
ptgs2
Prostaglandin-endoperoxide synthase 2b.
   
 0.848
hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 0.843
W5NNT2_LEPOC
Sulfite oxidase; Belongs to the cytochrome b5 family.
     
 0.841
PTGS1
Prostaglandin-endoperoxide synthase 1.
   
 0.832
W5MKE7_LEPOC
Prostaglandin E synthase 3b (cytosolic).
     
 0.825
W5MEI6_LEPOC
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.824
msmo1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.824
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.