STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102698091Si:rp71-1f1.4; Belongs to the arylamine N-acetyltransferase family. (285 aa)    
Predicted Functional Partners:
W5MTS1_LEPOC
Cytochrome P450, family 1, subfamily D, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.653
LOC102687541
Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family.
   
 
 0.653
W5M196_LEPOC
WD repeat domain 18.
   
 0.574
LOC102691296
Aldehyde oxidase 6.
   
 
 0.562
LOC102691496
Aldehyde oxidase 5.
   
 
 0.562
W5NFP8_LEPOC
Xanthine dehydrogenase.
   
 
 0.562
W5MDV3_LEPOC
Testis expressed 10.
    
 0.547
LOC102696091
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
  0.542
FAM78A
Family with sequence similarity 78 member A.
    
  0.542
W5MVT1_LEPOC
Family with sequence similarity 78 member Bb.
    
  0.542
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.