STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pfn3Profilin; Belongs to the profilin family. (137 aa)    
Predicted Functional Partners:
W5MLR3_LEPOC
Amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein.
    
 0.855
pfn4
Profilin; Belongs to the profilin family.
     
 0.792
diaph3
Diaphanous-related formin 3.
    
 0.788
DIAPH1
Diaphanous related formin 1.
    
 0.788
W5NE24_LEPOC
Diaphanous-related formin 2.
    
 0.788
W5MSI1_LEPOC
Dishevelled associated activator of morphogenesis 1a.
    
 0.767
daam2
Dishevelled associated activator of morphogenesis 2.
    
 0.767
raph1
Ras association (RalGDS/AF-6) and pleckstrin homology domains 1a.
    
 0.746
W5N4E0_LEPOC
Formin 1.
    
 0.741
fmn2
Formin 2a.
    
 0.741
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.